PhDs completed in CUB

• January 2014 - Maria Gutierrez Arcelus, Mechanisms and tissue specificity of the genetic and epigenetic variation in gene regulation. Supervised in E. Dermitzakis' group
• August 2013 - Jia Li, Analysis of evolutionary constraints on gene arrangements in animal genomes. Supervised in E. Zdobnov's group
• December 2012 - Sandra Calderon Copete, Next generation sequencing bioinformatics for the analysis of whole microbial genomes. Supervised in I. Xenarios' group
• September 2012 - Dominique Koua, Bioinformatics tools to assist drug candidate discovery in venom gland transcriptomes. Supervised in F. Lisacek's group
• August 2012 - Charles Vejnar, Computational prediction of microRNA targets: thermodynamic, probabilistic and evolutionary models parameterized by genome-scale experimental data. Supervised in E. Zdobnov's group
• July 2011 - Federico Santoni, Deciphering the code for retroviral integration site selection. Supervised in B. Chopard's group, in collaboration with Prof. J. Luban
• May 2011 - Erik Ahrné, Exploring the use of MS/MS spectral libraries to improve protein identification and characterisation. Supervised in F. Lisacek's group
• May 2011 - Thomas Junier, High-throughput phylogenomics : from vertebrate conserved non-coding sequences to viral genomics. Supervised in E. Zdobnov's group
• May 2010 - Daniel Gerlach, Computational prediction of functional RNA structures: A study of the animal miRNAome and cis-acting replication elements in enteroviruses. Supervised in E. Zdobnov's group
• April 2010 - Yann Mauron - SmileMS, a small molecule identification platform applied to clinical toxicology, Supervised in F. Lisacek's group, in collaboration with Prof. D. Hochstrasser
• April 2010 - Roman Mylonas - X-Rank, a robust library search algorithm, Supervised in F. Lisacek's group, in collaboration with Prof. D. Hochstrasser